AEPsych
Demos
Docs
Tutorials
API Reference
GitHub
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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K
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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Y
A
accept_client() (aepsych.server.sockets.PySocket method)
AcqArgProtocol (class in aepsych.generators.base)
acqf (aepsych.generators.base.AcqfGenerator attribute)
(aepsych.transforms.parameters.ParameterTransformedGenerator property)
acqf_kwargs (aepsych.generators.base.AcqfGenerator attribute)
(aepsych.transforms.parameters.ParameterTransformedGenerator property)
AcqfGenerator (class in aepsych.generators.base)
AcqfGridSearchGenerator (class in aepsych.generators)
AcqfThompsonSamplerGenerator (class in aepsych.generators)
acquisition() (aepsych.acquisition.BernoulliMCMutualInformation method)
(aepsych.acquisition.lse.MCLevelSetEstimation method)
(aepsych.acquisition.mc_posterior_variance.MCPosteriorVariance method)
(aepsych.acquisition.MCLevelSetEstimation method)
(aepsych.acquisition.MCPosteriorVariance method)
(aepsych.acquisition.mutual_information.BernoulliMCMutualInformation method)
add_data() (aepsych.strategy.SequentialStrategy method)
(aepsych.strategy.Strategy method)
aepsych.acquisition
module
aepsych.acquisition.bvn
module
aepsych.acquisition.lookahead
module
aepsych.acquisition.lookahead_utils
module
aepsych.acquisition.lse
module
aepsych.acquisition.mc_posterior_variance
module
aepsych.acquisition.mutual_information
module
aepsych.acquisition.objective
module
aepsych.benchmark
module
aepsych.benchmark.benchmark
module
aepsych.benchmark.pathos_benchmark
module
aepsych.benchmark.problem
module
aepsych.benchmark.test_functions
module
aepsych.config
module
aepsych.database
module
aepsych.database.db
module
aepsych.database.tables
module
aepsych.factory
module
aepsych.generators
module
aepsych.generators.base
module
aepsych.generators.epsilon_greedy_generator
module
aepsych.generators.manual_generator
module
aepsych.generators.optimize_acqf_generator
module
aepsych.generators.random_generator
module
aepsych.generators.sobol_generator
module
aepsych.kernels
module
aepsych.likelihoods
module
aepsych.models
module
aepsych.models.base
module
aepsych.models.gp_classification
module
aepsych.models.inducing_points
module
aepsych.plotting
module
aepsych.server
module
aepsych.server.server
module
aepsych.server.sockets
module
aepsych.strategy
module
aepsych.transforms.ops
module
aepsych.transforms.parameters
module
aepsych.utils
module
aepsych.utils_logging
module
AEPsychGenerator (class in aepsych.generators.base)
AEPsychModelMixin (class in aepsych.models.base)
AEPsychObjective (class in aepsych.acquisition.objective)
AEPsychServer (class in aepsych.server)
(class in aepsych.server.server)
allocate_inducing_points() (aepsych.models.inducing_points.FixedAllocator method)
(aepsych.models.inducing_points.GreedyVarianceReduction method)
(aepsych.models.inducing_points.KMeansAllocator method)
(aepsych.models.inducing_points.SobolAllocator method)
ApproxGlobalSUR (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
approximate_lookahead_levelset_at_xstar() (in module aepsych.acquisition.lookahead_utils)
B
bald_acq() (in module aepsych.acquisition.mutual_information)
balv_acq() (in module aepsych.acquisition.mc_posterior_variance)
baseline_requiring_acqfs (aepsych.generators.base.AcqfGenerator attribute)
BEMPS (class in aepsych.acquisition.lookahead)
Benchmark (class in aepsych.benchmark)
(class in aepsych.benchmark.benchmark)
BernoulliMCMutualInformation (class in aepsych.acquisition)
(class in aepsych.acquisition.mutual_information)
BernoulliObjectiveLikelihood (class in aepsych.likelihoods)
bold_red (aepsych.utils_logging.ColorFormatter attribute)
bounds (aepsych.benchmark.ContrastSensitivity6d attribute)
(aepsych.benchmark.DiscrimHighDim attribute)
(aepsych.benchmark.DiscrimLowDim attribute)
(aepsych.benchmark.Hartmann6Binary attribute)
(aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
bvn_cdf() (in module aepsych.acquisition.bvn)
C
calculate_probs() (aepsych.models.OrdinalGPModel method)
can_fit (aepsych.strategy.Strategy property)
can_pregen_ask (aepsych.server.AEPsychServer property)
(aepsych.server.server.AEPsychServer property)
cdf_new_novel_det() (in module aepsych.benchmark.test_functions)
cdf_new_novel_det_3D() (in module aepsych.benchmark.test_functions)
cdf_new_novel_det_channels() (in module aepsych.benchmark.test_functions)
children_config (aepsych.database.tables.DBMasterTable attribute)
children_outcome (aepsych.database.tables.DbRawTable attribute)
children_param (aepsych.database.tables.DbRawTable attribute)
children_raw (aepsych.database.tables.DBMasterTable attribute)
children_replay (aepsych.database.tables.DBMasterTable attribute)
children_strat (aepsych.database.tables.DBMasterTable attribute)
ClassErr() (in module aepsych.acquisition.lookahead)
cleanup() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
close() (aepsych.server.sockets.DummySocket method)
(aepsych.server.sockets.PySocket method)
collate_benchmarks() (aepsych.benchmark.pathos_benchmark.PathosBenchmark method)
(aepsych.benchmark.PathosBenchmark method)
ColorFormatter (class in aepsych.utils_logging)
config (aepsych.database.tables.DbConfigTable attribute)
(aepsych.server.AEPsychServer property)
(aepsych.server.server.AEPsychServer property)
Config (class in aepsych.config)
ConfigurableMixin (class in aepsych.config)
construct_inputs() (in module aepsych.acquisition.mc_posterior_variance)
construct_inputs_global_lookahead() (in module aepsych.acquisition.lookahead)
construct_inputs_local_lookahead() (in module aepsych.acquisition.lookahead)
construct_inputs_lse() (in module aepsych.acquisition.lse)
construct_inputs_mi() (in module aepsych.acquisition.mutual_information)
ContrastSensitivity6d (class in aepsych.benchmark)
cutpoints (aepsych.likelihoods.OrdinalLikelihood property)
D
Database (class in aepsych.database.db)
DbConfigTable (class in aepsych.database.tables)
DBMasterTable (class in aepsych.database.tables)
DbOutcomeTable (class in aepsych.database.tables)
DbParamTable (class in aepsych.database.tables)
DbRawTable (class in aepsych.database.tables)
DbReplayTable (class in aepsych.database.tables)
DbStratTable (class in aepsych.database.tables)
default_mean_covar_factory() (in module aepsych.factory)
delete_db() (aepsych.database.db.Database method)
DerivedValue (class in aepsych.benchmark)
(class in aepsych.benchmark.benchmark)
device (aepsych.models.base.AEPsychModelMixin property)
dim (aepsych.generators.base.AEPsychGenerator attribute)
dim_grid() (in module aepsych.utils)
discrim_highdim() (in module aepsych.benchmark)
(in module aepsych.benchmark.test_functions)
DiscrimHighDim (class in aepsych.benchmark)
DiscrimLowDim (class in aepsych.benchmark)
DummySocket (class in aepsych.server.sockets)
E
EAVC (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
EAVC_fn() (in module aepsych.acquisition.lookahead)
eps (aepsych.benchmark.LSEProblemWithEdgeLogging attribute)
(aepsych.benchmark.problem.LSEProblemWithEdgeLogging attribute)
EpsilonGreedyGenerator (class in aepsych.generators)
(class in aepsych.generators.epsilon_greedy_generator)
eval() (aepsych.transforms.parameters.ParameterTransformedGenerator method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
eval_grid (aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
evaluate() (aepsych.benchmark.LSEProblem method)
(aepsych.benchmark.LSEProblemWithEdgeLogging method)
(aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.LSEProblem method)
(aepsych.benchmark.problem.LSEProblemWithEdgeLogging method)
(aepsych.benchmark.problem.Problem method)
execute_sql_query() (aepsych.database.db.Database method)
expected_log_prob() (aepsych.likelihoods.LinearBernoulliLikelihood method)
experiment_description (aepsych.database.tables.DBMasterTable attribute)
experiment_id (aepsych.database.tables.DBMasterTable attribute)
experiment_name (aepsych.database.tables.DBMasterTable attribute)
extra_data (aepsych.database.tables.DbRawTable attribute)
extra_info (aepsych.database.tables.DbReplayTable attribute)
extra_metadata (aepsych.database.tables.DBMasterTable attribute)
extremum_solver (aepsych.models.base.AEPsychModelMixin attribute)
F
f() (aepsych.benchmark.ContrastSensitivity6d method)
(aepsych.benchmark.DiscrimHighDim method)
(aepsych.benchmark.DiscrimLowDim method)
(aepsych.benchmark.Hartmann6Binary method)
(aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.Problem method)
(aepsych.likelihoods.LinearBernoulliLikelihood method)
f_1d() (in module aepsych.benchmark.test_functions)
f_2d() (in module aepsych.benchmark.test_functions)
f_hat() (aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.Problem method)
f_pairwise() (in module aepsych.benchmark.test_functions)
f_threshold() (aepsych.benchmark.LSEProblem method)
(aepsych.benchmark.problem.LSEProblem method)
f_true (aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
facet_slices() (in module aepsych.plotting)
finish() (aepsych.strategy.SequentialStrategy method)
(aepsych.strategy.Strategy method)
finished (aepsych.generators.manual_generator.ManualGenerator property)
(aepsych.generators.ManualGenerator property)
(aepsych.strategy.SequentialStrategy property)
(aepsych.strategy.Strategy property)
fit() (aepsych.models.GPRegressionModel method)
(aepsych.models.PairwiseProbitModel method)
(aepsych.models.SemiParametricGPModel method)
(aepsych.models.VariationalGPModel method)
(aepsych.strategy.Strategy method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
Fixed (class in aepsych.transforms.ops)
FixedAllocator (class in aepsych.models.inducing_points)
flatten_config() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
FloorGumbelObjective (class in aepsych.acquisition)
(class in aepsych.acquisition.objective)
FloorLogitObjective (class in aepsych.acquisition)
(class in aepsych.acquisition.objective)
FloorProbitObjective (class in aepsych.acquisition)
(class in aepsych.acquisition.objective)
format() (aepsych.utils_logging.ColorFormatter method)
FORMATS (aepsych.utils_logging.ColorFormatter attribute)
forward() (aepsych.acquisition.BernoulliMCMutualInformation method)
(aepsych.acquisition.lookahead.GlobalLookaheadAcquisitionFunction method)
(aepsych.acquisition.lookahead.LocalLookaheadAcquisitionFunction method)
(aepsych.acquisition.lse.MCLevelSetEstimation method)
(aepsych.acquisition.mc_posterior_variance.MCPosteriorVariance method)
(aepsych.acquisition.MCLevelSetEstimation method)
(aepsych.acquisition.MCPosteriorVariance method)
(aepsych.acquisition.mutual_information.BernoulliMCMutualInformation method)
(aepsych.acquisition.objective.ProbitObjective method)
(aepsych.acquisition.objective.SemiPProbabilityObjective method)
(aepsych.acquisition.objective.SemiPThresholdObjective method)
(aepsych.acquisition.ProbitObjective method)
(aepsych.kernels.PairwiseKernel method)
(aepsych.likelihoods.BernoulliObjectiveLikelihood method)
(aepsych.likelihoods.LinearBernoulliLikelihood method)
(aepsych.likelihoods.OrdinalLikelihood method)
(aepsych.models.base.AEPsychModelMixin method)
(aepsych.models.HadamardSemiPModel method)
from_config() (aepsych.config.ConfigurableMixin class method)
(aepsych.generators.base.AcqArgProtocol class method)
from_sqlite() (aepsych.database.tables.DbConfigTable class method)
(aepsych.database.tables.DBMasterTable class method)
(aepsych.database.tables.DbOutcomeTable class method)
(aepsych.database.tables.DbParamTable class method)
(aepsych.database.tables.DbRawTable class method)
(aepsych.database.tables.DbReplayTable class method)
(aepsych.database.tables.DbStratTable class method)
G
gen() (aepsych.generators.base.AEPsychGenerator method)
(aepsych.generators.epsilon_greedy_generator.EpsilonGreedyGenerator method)
(aepsych.generators.EpsilonGreedyGenerator method)
(aepsych.generators.IntensityAwareSemiPGenerator method)
(aepsych.generators.manual_generator.ManualGenerator method)
(aepsych.generators.ManualGenerator method)
(aepsych.generators.optimize_acqf_generator.OptimizeAcqfGenerator method)
(aepsych.generators.OptimizeAcqfGenerator method)
(aepsych.generators.random_generator.RandomGenerator method)
(aepsych.generators.RandomGenerator method)
(aepsych.generators.sobol_generator.SobolGenerator method)
(aepsych.generators.SobolGenerator method)
(aepsych.strategy.SequentialStrategy method)
(aepsych.strategy.Strategy method)
(aepsych.transforms.parameters.ParameterTransformedGenerator method)
generate_debug_info() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
generate_default_outcome_names() (in module aepsych.utils)
get_bounds() (in module aepsych.utils)
get_config_for() (aepsych.database.db.Database method)
get_config_options() (aepsych.acquisition.objective.SemiPProbabilityObjective class method)
(aepsych.acquisition.objective.SemiPThresholdObjective class method)
(aepsych.config.ConfigurableMixin class method)
(aepsych.generators.base.AcqfGenerator class method)
(aepsych.generators.epsilon_greedy_generator.EpsilonGreedyGenerator class method)
(aepsych.generators.EpsilonGreedyGenerator class method)
(aepsych.generators.manual_generator.ManualGenerator class method)
(aepsych.generators.ManualGenerator class method)
(aepsych.likelihoods.BernoulliObjectiveLikelihood class method)
(aepsych.models.base.AEPsychModelMixin class method)
(aepsych.models.HadamardSemiPModel class method)
(aepsych.models.inducing_points.SobolAllocator class method)
(aepsych.models.PairwiseProbitModel class method)
(aepsych.strategy.SequentialStrategy class method)
(aepsych.strategy.Strategy class method)
(aepsych.transforms.ops.Fixed class method)
(aepsych.transforms.ops.Log10Plus class method)
(aepsych.transforms.ops.NormalizeScale class method)
(aepsych.transforms.parameters.ParameterTransformedGenerator class method)
(aepsych.transforms.parameters.ParameterTransformedModel class method)
(aepsych.transforms.parameters.ParameterTransforms class method)
get_data_frame() (aepsych.database.db.Database method)
get_dataframe_from_replay() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
get_dims() (in module aepsych.utils)
get_engine() (aepsych.database.db.Database method)
get_jnd_1d() (in module aepsych.utils)
get_jnd_multid() (in module aepsych.utils)
get_lse_contour() (in module aepsych.utils)
get_lse_interval() (in module aepsych.utils)
get_master_record() (aepsych.database.db.Database method)
get_master_records() (aepsych.database.db.Database method)
get_max() (aepsych.strategy.Strategy method)
get_metadata() (aepsych.config.Config method)
get_min() (aepsych.strategy.Strategy method)
get_next_filename() (in module aepsych.server.server)
get_optimizer_options() (in module aepsych.utils)
get_outcomes_for() (aepsych.database.db.Database method)
get_params_for() (aepsych.database.db.Database method)
get_raw_for() (aepsych.database.db.Database method)
get_replay_for() (aepsych.database.db.Database method)
get_section() (aepsych.config.Config method)
get_strat_for() (aepsych.database.db.Database method)
get_strat_from_replay() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
get_strats_for() (aepsych.database.db.Database method)
get_strats_from_replay() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
getLogger() (in module aepsych.utils_logging)
GlobalLookaheadAcquisitionFunction (class in aepsych.acquisition.lookahead)
GlobalMI (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
GlobalSUR (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
GPClassificationModel (class in aepsych.models)
(class in aepsych.models.gp_classification)
GPRegressionModel (class in aepsych.models)
GreedyVarianceReduction (class in aepsych.models.inducing_points)
grey (aepsych.utils_logging.ColorFormatter attribute)
H
HadamardSemiPModel (class in aepsych.models)
handle_request() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
Hartmann6Binary (class in aepsych.benchmark)
Hb() (in module aepsych.acquisition.lookahead)
I
indices_to_str() (aepsych.transforms.parameters.ParameterTransforms method)
IntensityAwareSemiPGenerator (class in aepsych.generators)
interpolate_monotonic() (in module aepsych.utils)
inv_query() (aepsych.strategy.Strategy method)
inverse() (aepsych.acquisition.objective.AEPsychObjective method)
(aepsych.acquisition.objective.ProbitObjective method)
(aepsych.acquisition.ProbitObjective method)
inverse_link() (aepsych.acquisition.FloorGumbelObjective method)
(aepsych.acquisition.FloorLogitObjective method)
(aepsych.acquisition.FloorProbitObjective method)
(aepsych.acquisition.objective.FloorGumbelObjective method)
(aepsych.acquisition.objective.FloorLogitObjective method)
(aepsych.acquisition.objective.FloorProbitObjective method)
is_done (aepsych.benchmark.pathos_benchmark.PathosBenchmark property)
(aepsych.benchmark.PathosBenchmark property)
is_update_required() (aepsych.database.db.Database method)
iteration_id (aepsych.database.tables.DbOutcomeTable attribute)
(aepsych.database.tables.DbParamTable attribute)
J
jsonifyAll() (aepsych.config.Config method)
jsonifyMetadata() (aepsych.config.Config method)
K
KMeansAllocator (class in aepsych.models.inducing_points)
L
lb (aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
likelihood (aepsych.models.GPClassificationModel attribute)
LinearBernoulliLikelihood (class in aepsych.likelihoods)
link() (aepsych.acquisition.FloorGumbelObjective method)
(aepsych.acquisition.FloorLogitObjective method)
(aepsych.acquisition.FloorProbitObjective method)
(aepsych.acquisition.objective.FloorGumbelObjective method)
(aepsych.acquisition.objective.FloorLogitObjective method)
(aepsych.acquisition.objective.FloorProbitObjective method)
LocalLookaheadAcquisitionFunction (class in aepsych.acquisition.lookahead)
LocalMI (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
LocalSUR (class in aepsych.acquisition)
(class in aepsych.acquisition.lookahead)
Log10Plus (class in aepsych.transforms.ops)
log_at() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
lookahead_levelset_at_xstar() (in module aepsych.acquisition.lookahead_utils)
lookahead_p_at_xstar() (in module aepsych.acquisition.lookahead_utils)
LookaheadAcquisitionFunction (class in aepsych.acquisition.lookahead)
LSEProblem (class in aepsych.benchmark)
(class in aepsych.benchmark.problem)
LSEProblemWithEdgeLogging (class in aepsych.benchmark)
(class in aepsych.benchmark.problem)
M
main() (in module aepsych.server.server)
make_benchmark_list() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
make_scaled_sobol() (in module aepsych.utils)
make_songetal_testfun() (in module aepsych.benchmark)
(in module aepsych.benchmark.test_functions)
make_songetal_threshfun() (in module aepsych.benchmark.test_functions)
make_strat_and_flatconfig() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
ManualGenerator (class in aepsych.generators)
(class in aepsych.generators.manual_generator)
master_table_id (aepsych.database.tables.DbConfigTable attribute)
(aepsych.database.tables.DbRawTable attribute)
(aepsych.database.tables.DbReplayTable attribute)
(aepsych.database.tables.DbStratTable attribute)
materialize_config() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
max_asks (aepsych.generators.base.AEPsychGenerator attribute)
MCLevelSetEstimation (class in aepsych.acquisition)
(class in aepsych.acquisition.lse)
MCPosteriorVariance (class in aepsych.acquisition)
(class in aepsych.acquisition.mc_posterior_variance)
message_contents (aepsych.database.tables.DbReplayTable attribute)
message_type (aepsych.database.tables.DbReplayTable attribute)
metadata (aepsych.benchmark.LSEProblem property)
(aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.LSEProblem property)
(aepsych.benchmark.problem.Problem property)
MI_fn() (in module aepsych.acquisition.lookahead)
MOCU (class in aepsych.acquisition.lookahead)
model_data (aepsych.database.tables.DbRawTable attribute)
modified_hartmann6() (in module aepsych.benchmark)
(in module aepsych.benchmark.test_functions)
module
aepsych.acquisition
aepsych.acquisition.bvn
aepsych.acquisition.lookahead
aepsych.acquisition.lookahead_utils
aepsych.acquisition.lse
aepsych.acquisition.mc_posterior_variance
aepsych.acquisition.mutual_information
aepsych.acquisition.objective
aepsych.benchmark
aepsych.benchmark.benchmark
aepsych.benchmark.pathos_benchmark
aepsych.benchmark.problem
aepsych.benchmark.test_functions
aepsych.config
aepsych.database
aepsych.database.db
aepsych.database.tables
aepsych.factory
aepsych.generators
aepsych.generators.base
aepsych.generators.epsilon_greedy_generator
aepsych.generators.manual_generator
aepsych.generators.optimize_acqf_generator
aepsych.generators.random_generator
aepsych.generators.sobol_generator
aepsych.kernels
aepsych.likelihoods
aepsych.models
aepsych.models.base
aepsych.models.gp_classification
aepsych.models.inducing_points
aepsych.plotting
aepsych.server
aepsych.server.server
aepsych.server.sockets
aepsych.strategy
aepsych.transforms.ops
aepsych.transforms.parameters
aepsych.utils
aepsych.utils_logging
MonotonicProjectionGP (class in aepsych.models)
my_format (aepsych.utils_logging.ColorFormatter attribute)
N
n_eval_points (aepsych.benchmark.Problem attribute)
(aepsych.benchmark.problem.Problem attribute)
n_strats (aepsych.server.AEPsychServer property)
(aepsych.server.server.AEPsychServer property)
name (aepsych.benchmark.ContrastSensitivity6d attribute)
(aepsych.benchmark.DiscrimHighDim attribute)
(aepsych.benchmark.DiscrimLowDim attribute)
(aepsych.benchmark.Hartmann6Binary attribute)
(aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
new_novel_det() (in module aepsych.benchmark.test_functions)
new_novel_det_3D() (in module aepsych.benchmark.test_functions)
new_novel_det_3D_params() (in module aepsych.benchmark.test_functions)
new_novel_det_channels() (in module aepsych.benchmark.test_functions)
new_novel_det_channels_params() (in module aepsych.benchmark.test_functions)
new_novel_det_params() (in module aepsych.benchmark.test_functions)
normalize_inputs() (aepsych.strategy.Strategy method)
NormalizeScale (class in aepsych.transforms.ops)
novel_detection_testfun() (in module aepsych.benchmark)
(in module aepsych.benchmark.test_functions)
novel_discrimination_testfun() (in module aepsych.benchmark)
(in module aepsych.benchmark.test_functions)
num_benchmarks (aepsych.benchmark.Benchmark property)
(aepsych.benchmark.benchmark.Benchmark property)
O
OptimizeAcqfGenerator (class in aepsych.generators)
(class in aepsych.generators.optimize_acqf_generator)
ordinal_mean_covar_factory() (in module aepsych.factory)
OrdinalGPModel (class in aepsych.models)
OrdinalLikelihood (class in aepsych.likelihoods)
outcome_name (aepsych.database.tables.DbOutcomeTable attribute)
outcome_type (aepsych.models.gp_classification.GPClassificationModel attribute)
(aepsych.models.GPClassificationModel attribute)
(aepsych.models.GPRegressionModel attribute)
(aepsych.models.HadamardSemiPModel attribute)
(aepsych.models.OrdinalGPModel attribute)
(aepsych.models.PairwiseProbitModel attribute)
(aepsych.models.SemiParametricGPModel attribute)
outcome_types (aepsych.models.base.AEPsychModelMixin attribute)
outcome_value (aepsych.database.tables.DbOutcomeTable attribute)
P
p() (aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.Problem method)
(aepsych.likelihoods.LinearBernoulliLikelihood method)
p_hat() (aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.Problem method)
p_true (aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
pairwise_mean_covar_factory() (in module aepsych.factory)
PairwiseKernel (class in aepsych.kernels)
PairwiseProbitModel (class in aepsych.models)
pandas() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
param_name (aepsych.database.tables.DbParamTable attribute)
param_value (aepsych.database.tables.DbParamTable attribute)
ParameterConfigError
ParameterTransformedGenerator (class in aepsych.transforms.parameters)
ParameterTransformedModel (class in aepsych.transforms.parameters)
ParameterTransforms (class in aepsych.transforms.parameters)
ParameterTransformWrapper (class in aepsych.transforms.parameters)
parent (aepsych.database.tables.DbConfigTable attribute)
(aepsych.database.tables.DbOutcomeTable attribute)
(aepsych.database.tables.DbParamTable attribute)
(aepsych.database.tables.DbRawTable attribute)
(aepsych.database.tables.DbReplayTable attribute)
(aepsych.database.tables.DbStratTable attribute)
parnames (aepsych.server.AEPsychServer property)
(aepsych.server.server.AEPsychServer property)
parse_argument() (in module aepsych.server.server)
participant_id (aepsych.database.tables.DBMasterTable attribute)
PathosBenchmark (class in aepsych.benchmark)
(class in aepsych.benchmark.pathos_benchmark)
perform_updates() (aepsych.database.db.Database method)
plot_contours() (in module aepsych.plotting)
plot_points_1d() (in module aepsych.plotting)
plot_points_2d() (in module aepsych.plotting)
plot_predict_1d() (in module aepsych.plotting)
plot_predict_2d() (in module aepsych.plotting)
plot_slice() (in module aepsych.plotting)
plot_strat() (in module aepsych.plotting)
plot_strat_3d() (in module aepsych.plotting)
posterior() (aepsych.models.MonotonicProjectionGP method)
(aepsych.models.SemiParametricGPModel method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
posterior_at_xstar_xq() (in module aepsych.acquisition.lookahead_utils)
pre_warm_model() (aepsych.strategy.Strategy method)
predict() (aepsych.models.base.AEPsychModelMixin method)
(aepsych.models.gp_classification.GPClassificationModel method)
(aepsych.models.GPClassificationModel method)
(aepsych.models.HadamardSemiPModel method)
(aepsych.models.PairwiseProbitModel method)
(aepsych.models.SemiParametricGPModel method)
(aepsych.strategy.Strategy method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
predict_probability() (aepsych.models.gp_classification.GPClassificationModel method)
(aepsych.models.GPClassificationModel method)
(aepsych.models.PairwiseProbitModel method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
predict_probs() (aepsych.models.OrdinalGPModel method)
predict_transform() (aepsych.models.base.AEPsychModelMixin method)
(aepsych.models.gp_classification.GPClassificationModel method)
(aepsych.models.GPClassificationModel method)
ProbitObjective (class in aepsych.acquisition)
(class in aepsych.acquisition.objective)
Problem (class in aepsych.benchmark)
(class in aepsych.benchmark.problem)
promote_0d() (in module aepsych.utils)
PySocket (class in aepsych.server.sockets)
R
RandomGenerator (class in aepsych.generators)
(class in aepsych.generators.random_generator)
receive() (aepsych.server.sockets.PySocket method)
record_config() (aepsych.database.db.Database method)
record_message() (aepsych.database.db.Database method)
record_outcome() (aepsych.database.db.Database method)
record_param() (aepsych.database.db.Database method)
record_raw() (aepsych.database.db.Database method)
record_setup() (aepsych.database.db.Database method)
record_strat() (aepsych.database.db.Database method)
red (aepsych.utils_logging.ColorFormatter attribute)
register_module() (aepsych.config.Config class method)
register_object() (aepsych.config.Config class method)
registered_names (aepsych.config.Config attribute)
replay() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
requires_update() (aepsych.database.tables.DbConfigTable static method)
(aepsych.database.tables.DBMasterTable static method)
(aepsych.database.tables.DbOutcomeTable static method)
(aepsych.database.tables.DbParamTable static method)
(aepsych.database.tables.DbRawTable static method)
(aepsych.database.tables.DbReplayTable static method)
(aepsych.database.tables.DbStratTable static method)
reset (aepsych.utils_logging.ColorFormatter attribute)
return_socket() (aepsych.server.sockets.PySocket method)
Round (class in aepsych.transforms.ops)
run_benchmarks() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
(aepsych.benchmark.pathos_benchmark.PathosBenchmark method)
(aepsych.benchmark.PathosBenchmark method)
run_benchmarks_with_checkpoints() (in module aepsych.benchmark)
(in module aepsych.benchmark.pathos_benchmark)
run_experiment() (aepsych.benchmark.Benchmark method)
(aepsych.benchmark.benchmark.Benchmark method)
(aepsych.benchmark.pathos_benchmark.PathosBenchmark method)
(aepsych.benchmark.PathosBenchmark method)
S
sample() (aepsych.models.base.AEPsychModelMixin method)
(aepsych.models.MonotonicProjectionGP method)
(aepsych.models.PairwiseProbitModel method)
(aepsych.models.SemiParametricGPModel method)
(aepsych.strategy.Strategy method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
sample_y() (aepsych.benchmark.Problem method)
(aepsych.benchmark.problem.Problem method)
SampleAroundPointsGenerator (class in aepsych.generators)
(class in aepsych.generators.manual_generator)
semi_p_posterior_transform() (in module aepsych.models)
SemiParametricGPModel (class in aepsych.models)
SemiPProbabilityObjective (class in aepsych.acquisition.objective)
SemiPThresholdObjective (class in aepsych.acquisition.objective)
send() (aepsych.server.sockets.PySocket method)
SequentialStrategy (class in aepsych.strategy)
serve() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
session_scope() (aepsych.database.db.Database method)
set_train_data() (aepsych.models.base.AEPsychModelMixin method)
SimplifyArrays() (in module aepsych.server.sockets)
SMOCU (class in aepsych.acquisition.lookahead)
SobolAllocator (class in aepsych.models.inducing_points)
SobolGenerator (class in aepsych.generators)
(class in aepsych.generators.sobol_generator)
song_mean_covar_factory() (in module aepsych.factory)
start_benchmarks() (aepsych.benchmark.pathos_benchmark.PathosBenchmark method)
(aepsych.benchmark.PathosBenchmark method)
start_server() (in module aepsych.server.server)
startServerAndRun() (in module aepsych.server.server)
stimuli_per_trial (aepsych.generators.base.AEPsychGenerator attribute)
(aepsych.models.base.AEPsychModelMixin attribute)
(aepsych.models.gp_classification.GPClassificationModel attribute)
(aepsych.models.GPClassificationModel attribute)
(aepsych.models.GPRegressionModel attribute)
(aepsych.models.HadamardSemiPModel attribute)
(aepsych.models.PairwiseProbitModel attribute)
(aepsych.models.SemiParametricGPModel attribute)
str_to_indices() (aepsych.transforms.parameters.ParameterTransforms method)
strat (aepsych.database.tables.DbStratTable attribute)
(aepsych.server.AEPsychServer property)
(aepsych.server.server.AEPsychServer property)
Strategy (class in aepsych.strategy)
summarize_experiments() (aepsych.database.db.Database method)
SUR_fn() (in module aepsych.acquisition.lookahead)
T
target_new_novel_det() (in module aepsych.benchmark.test_functions)
target_new_novel_det_3D() (in module aepsych.benchmark.test_functions)
target_new_novel_det_channels() (in module aepsych.benchmark.test_functions)
timestamp (aepsych.database.tables.DbConfigTable attribute)
(aepsych.database.tables.DbRawTable attribute)
(aepsych.database.tables.DbReplayTable attribute)
(aepsych.database.tables.DbStratTable attribute)
to_csv() (aepsych.database.db.Database method)
to_dict() (aepsych.config.Config method)
train() (aepsych.transforms.parameters.ParameterTransformedGenerator method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
train_inputs (aepsych.models.base.AEPsychModelMixin property)
train_targets (aepsych.models.base.AEPsychModelMixin property)
training (aepsych.models.GPClassificationModel attribute)
(aepsych.transforms.parameters.ParameterTransformedGenerator property)
(aepsych.transforms.parameters.ParameterTransformedModel property)
transform() (aepsych.transforms.parameters.ParameterTransforms method)
transform_bounds() (aepsych.transforms.ops.Round method)
(aepsych.transforms.parameters.ParameterTransforms method)
transform_options() (in module aepsych.transforms.parameters)
transforms (aepsych.transforms.parameters.ParameterTransformWrapper attribute)
true_below_threshold (aepsych.benchmark.LSEProblem property)
(aepsych.benchmark.problem.LSEProblem property)
U
ub (aepsych.benchmark.Problem property)
(aepsych.benchmark.problem.Problem property)
unique_id (aepsych.database.tables.DbConfigTable attribute)
(aepsych.database.tables.DBMasterTable attribute)
(aepsych.database.tables.DbOutcomeTable attribute)
(aepsych.database.tables.DbParamTable attribute)
(aepsych.database.tables.DbRawTable attribute)
(aepsych.database.tables.DbReplayTable attribute)
(aepsych.database.tables.DbStratTable attribute)
untransform() (aepsych.transforms.parameters.ParameterTransforms method)
update() (aepsych.config.Config method)
(aepsych.database.tables.DbConfigTable static method)
(aepsych.database.tables.DBMasterTable static method)
(aepsych.database.tables.DbOutcomeTable static method)
(aepsych.database.tables.DbParamTable static method)
(aepsych.database.tables.DbRawTable static method)
(aepsych.database.tables.DbReplayTable static method)
(aepsych.database.tables.DbStratTable static method)
(aepsych.models.base.AEPsychModelMixin method)
(aepsych.models.VariationalGPModel method)
(aepsych.strategy.Strategy method)
(aepsych.transforms.parameters.ParameterTransformedModel method)
use_extra_info (aepsych.database.tables.DbReplayTable attribute)
V
VariationalGPModel (class in aepsych.models)
W
white (aepsych.utils_logging.ColorFormatter attribute)
write_strats() (aepsych.server.AEPsychServer method)
(aepsych.server.server.AEPsychServer method)
Y
yellow (aepsych.utils_logging.ColorFormatter attribute)
AEPsych
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aepsych.acquisition
aepsych.benchmark
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aepsych.factory
aepsych.generators
aepsych.kernels
aepsych.means
aepsych.models
aepsych.server
aepsych.config
aepsych.likelihoods
aepsych.plotting
aepsych.strategy
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aepsych.utils
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